Get Input Files from paths to create arrows

This function will look for fragment files and bam files in the input paths and return the full path and sample names. Only files that match ".fragments.tsv.gz" and ".bam" will be captured. This function requires there to be a prefix before ".fragments.tsv.gz" or ".bam" because this prefix will be used as the sample name. For example, "Sample1.fragments.tsv.gz" would be imported with the name "Sample1".

getInputFiles(paths = NULL)

Arguments

paths

A character vector of paths to search for usable input files.