Get the genes from an ArchRProject

This function gets the genes start and end coordinates as a GRanges object from the geneAnnotation of a given ArchRProject.

getGenes(ArchRProj = NULL, symbols = NULL)

Arguments

ArchRProj

An ArchRProject object.

symbols

A character vector containing the gene symbols to subset from the geneAnnotation.

Examples

# Get Test ArchR Project
proj <- getTestProject()

# Get Genes in ArchRProj
getGenes(proj)

# Get Genes globally
getGenes()